STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rafA_3Alpha-galactosidase. (729 aa)    
Predicted Functional Partners:
rafA_1
Alpha-galactosidase.
  
  
 
0.911
rafA_4
Alpha-galactosidase.
  
  
 
0.911
scrB
Sucrose-6-phosphate hydrolase.
    
 0.910
rafA_2
Alpha-galactosidase.
  
  
 
0.909
agaA_1
Alpha-galactosidase A precursor.
    
 0.903
agaA_2
Alpha-galactosidase A precursor.
   
 0.903
atsA_3
Arylsulfatase precursor.
     
 0.901
atsA_4
Arylsulfatase.
     
 0.901
bgaA_2
Beta-galactosidase BgaA.
 
  
 0.877
ALJ61450.1
Beta-galactosidase.
 
  
 0.865
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.