STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icdIsocitrate dehydrogenase [NADP]. (382 aa)    
Predicted Functional Partners:
citB
Aconitate hydratase.
 
 0.998
gltA
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.982
fumB
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.933
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.932
korA_1
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.914
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
 0.913
ALJ58203.1
2-oxoglutarate-acceptor oxidoreductase subunit OorD.
     
 0.911
korB_1
2-oxoglutarate oxidoreductase subunit KorB.
    
 0.910
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
    
 0.910
porC
Pyruvate synthase subunit PorC.
     
 0.909
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.