STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recD2_1ATP-dependent RecD-like DNA helicase. (627 aa)    
Predicted Functional Partners:
ALJ60594.1
Transposase DDE domain protein.
  
    0.585
ALJ62353.1
Hypothetical protein.
  
     0.581
ALJ57598.1
Hypothetical protein.
  
     0.568
ALJ60845.1
Hypothetical protein; Secretin and TonB N terminus short domain.
  
     0.518
ALJ61234.1
Hypothetical protein.
 
     0.499
ALJ57597.1
Calcineurin-like phosphoesterase.
  
     0.491
ALJ60044.1
Helix-hairpin-helix motif protein.
  
     0.469
cld
Hypothetical protein.
  
     0.437
gltA
Citrate synthase; Belongs to the citrate synthase family.
       0.430
icd
Isocitrate dehydrogenase [NADP].
       0.430
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.