STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59114.1Histidine phosphatase superfamily (branch 2). (431 aa)    
Predicted Functional Partners:
ALJ62383.1
Hypothetical protein; L-fucose isomerase, C-terminal domain.
 
     0.689
ALJ60801.1
Fibrobacter succinogenes major domain (Fib_succ_major).
  
     0.635
ALJ61504.1
Hypothetical protein.
  
     0.579
ALJ59139.1
Outer membrane protein 40 precursor.
  
     0.557
ALJ57984.1
Hypothetical protein.
  
     0.540
phoR_6
Alkaline phosphatase synthesis sensor protein PhoR.
  
     0.540
ALJ59408.1
Hypothetical protein.
  
     0.507
ALJ58546.1
Hypothetical protein.
  
     0.491
ALJ58383.1
Fibronectin type III domain protein.
  
     0.484
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).
       0.454
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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