Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ59252.1 | ALJ59253.1 | BcellWH2_02007 | BcellWH2_02008 | TonB dependent receptor. | SusD family protein. | 0.936 |
ALJ59252.1 | ALJ59254.1 | BcellWH2_02007 | BcellWH2_02009 | TonB dependent receptor. | Hypothetical protein. | 0.668 |
ALJ59252.1 | hypBA1_4 | BcellWH2_02007 | BcellWH2_02010 | TonB dependent receptor. | Non-reducing end beta-L-arabinofuranosidase. | 0.547 |
ALJ59252.1 | nphR | BcellWH2_02007 | BcellWH2_02006 | TonB dependent receptor. | Transcriptional activator NphR. | 0.469 |
ALJ59253.1 | ALJ59252.1 | BcellWH2_02008 | BcellWH2_02007 | SusD family protein. | TonB dependent receptor. | 0.936 |
ALJ59253.1 | ALJ59254.1 | BcellWH2_02008 | BcellWH2_02009 | SusD family protein. | Hypothetical protein. | 0.756 |
ALJ59253.1 | hypBA1_4 | BcellWH2_02008 | BcellWH2_02010 | SusD family protein. | Non-reducing end beta-L-arabinofuranosidase. | 0.587 |
ALJ59253.1 | nphR | BcellWH2_02008 | BcellWH2_02006 | SusD family protein. | Transcriptional activator NphR. | 0.412 |
ALJ59254.1 | ALJ59252.1 | BcellWH2_02009 | BcellWH2_02007 | Hypothetical protein. | TonB dependent receptor. | 0.668 |
ALJ59254.1 | ALJ59253.1 | BcellWH2_02009 | BcellWH2_02008 | Hypothetical protein. | SusD family protein. | 0.756 |
ALJ59254.1 | hypBA1_4 | BcellWH2_02009 | BcellWH2_02010 | Hypothetical protein. | Non-reducing end beta-L-arabinofuranosidase. | 0.676 |
ALJ59254.1 | nphR | BcellWH2_02009 | BcellWH2_02006 | Hypothetical protein. | Transcriptional activator NphR. | 0.407 |
ALJ59819.1 | ALJ60208.1 | BcellWH2_02580 | BcellWH2_02970 | Extracellular exo-alpha-L-arabinofuranosidase precursor. | Ricin-type beta-trefoil lectin domain protein. | 0.655 |
ALJ59819.1 | hypBA1_4 | BcellWH2_02580 | BcellWH2_02010 | Extracellular exo-alpha-L-arabinofuranosidase precursor. | Non-reducing end beta-L-arabinofuranosidase. | 0.512 |
ALJ59819.1 | smc_2 | BcellWH2_02580 | BcellWH2_03987 | Extracellular exo-alpha-L-arabinofuranosidase precursor. | Chromosome partition protein Smc. | 0.452 |
ALJ60076.1 | hypBA1_4 | BcellWH2_02837 | BcellWH2_02010 | Extracellular exo-alpha-L-arabinofuranosidase precursor. | Non-reducing end beta-L-arabinofuranosidase. | 0.532 |
ALJ60208.1 | ALJ59819.1 | BcellWH2_02970 | BcellWH2_02580 | Ricin-type beta-trefoil lectin domain protein. | Extracellular exo-alpha-L-arabinofuranosidase precursor. | 0.655 |
ALJ60208.1 | ALJ60214.1 | BcellWH2_02970 | BcellWH2_02976 | Ricin-type beta-trefoil lectin domain protein. | Extracellular exo-alpha-L-arabinofuranosidase precursor. | 0.423 |
ALJ60208.1 | hypBA1_4 | BcellWH2_02970 | BcellWH2_02010 | Ricin-type beta-trefoil lectin domain protein. | Non-reducing end beta-L-arabinofuranosidase. | 0.519 |
ALJ60208.1 | nphR | BcellWH2_02970 | BcellWH2_02006 | Ricin-type beta-trefoil lectin domain protein. | Transcriptional activator NphR. | 0.579 |
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