STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59333.1Hypothetical protein. (942 aa)    
Predicted Functional Partners:
yteR_6
Unsaturated rhamnogalacturonyl hydrolase YteR.
       0.789
rhgT_4
Rhamnogalacturonan acetylesterase RhgT.
 
 0.787
yesW_1
Rhamnogalacturonan endolyase YesW precursor.
 
 
 0.750
yteR_13
Unsaturated rhamnogalacturonyl hydrolase YteR.
 
    0.750
yteR_12
Unsaturated rhamnogalacturonyl hydrolase YteR.
 
 
 0.746
ALJ60528.1
SusD family protein.
 
  
 0.733
ALJ61444.1
SusD family protein.
 
  
 0.694
rhgT_2
Rhamnogalacturonan acetylesterase RhgT.
 
 
 0.684
ALJ59307.1
Hypothetical protein.
 
    0.679
ALJ60527.1
TonB-dependent Receptor Plug Domain protein.
  
  
 0.669
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.