STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59525.1Alpha-L-fucosidase. (504 aa)    
Predicted Functional Partners:
ALJ59524.1
Bacterial alpha-L-rhamnosidase.
       0.775
ALJ59523.1
Bacterial alpha-L-rhamnosidase.
       0.762
ALJ59522.1
Alpha-L-fucosidase.
 
    
0.700
yicI_2
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
     
 0.663
ALJ59764.1
Glycosyl hydrolases family 43.
 
     0.517
ALJ59526.1
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
       0.497
ALJ60493.1
Hypothetical protein.
  
     0.482
ALJ59589.1
Alpha-L-fucosidase.
  
     0.449
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.