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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuB_5Vitamin B12 transporter BtuB. (1046 aa)    
Predicted Functional Partners:
ALJ59642.1
SusD family protein.
 
    0.929
ALJ60823.1
SusD family protein.
  
     0.773
ALJ60870.1
SusD family protein.
 
     0.773
ALJ59759.1
SusD family protein.
 
    0.772
ALJ58361.1
SusD family protein.
 
     0.768
ALJ58427.1
SusD family protein.
 
     0.760
ALJ59174.1
SusD family protein.
 
     0.760
ALJ58443.1
SusD family protein.
 
     0.759
ALJ58825.1
SusD family protein.
 
    0.759
ALJ60487.1
SusD family protein.
 
    0.758
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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