Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
Experiments
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[Homology]
Score
ALJ59656.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
sufD
FeS cluster assembly protein SufD.
  
  
 0.766
sufS
Cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
    0.698
sufC
Putative ATP-dependent transporter SufC.
     
 0.631
yusV
Putative siderophore transport system ATP-binding protein YusV.
  
 
 0.605
fhuC
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
  
 
 0.605
hmuU
Hemin transport system permease protein HmuU; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.523
btuC
Vitamin B12 import system permease protein BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 
 0.523
ALJ59858.1
Hypothetical protein.
  
     0.439
sufB
FeS cluster assembly protein SufB.
  
  
 0.424
ALJ59659.1
Colicin V production protein.
  
    0.412
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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