Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
nplT_2Neopullulanase. (441 aa)    
Predicted Functional Partners:
nplT_3
Neopullulanase.
 
    
0.840
pulA
Pullulanase precursor; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.761
ALJ59674.1
Retaining alpha-galactosidase precursor.
 
  
 0.616
glgA_1
Glycogen synthase.
 
  
 0.580
ALJ59677.1
Hypothetical protein.
       0.550
glgB
1,4-alpha-glucan branching enzyme GlgB.
 
  
 0.540
ALJ59678.1
SusD family protein.
 
     0.524
gadC
Glutamate/gamma-aminobutyrate antiporter.
  
 0.499
ccpA_1
Catabolite control protein A.
 
  
 0.496
cytR_1
HTH-type transcriptional repressor CytR.
 
  
 0.491
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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