Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59678.1SusD family protein. (598 aa)    
Predicted Functional Partners:
ALJ59679.1
TonB dependent receptor.
 
     0.884
ntpB
V-type sodium ATPase subunit B.
  
 0.820
ntpA
V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.816
ALJ61714.1
TonB-dependent Receptor Plug Domain protein.
 
     0.781
ALJ62398.1
V-type ATP synthase subunit D.
  
 0.770
ALJ59252.1
TonB dependent receptor.
 
     0.767
ALJ60367.1
SusD family protein.
  
     0.753
ALJ62394.1
V-type ATP synthase subunit E.
  
 0.741
ALJ59581.1
SusD family protein.
  
     0.739
ALJ59677.1
Hypothetical protein.
       0.738
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.