Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59691.1Hypothetical protein. (399 aa)    
Predicted Functional Partners:
ALJ60436.1
Hypothetical protein.
  
     0.685
ALJ59055.1
Hypothetical protein.
  
     0.664
ALJ60025.1
Hypothetical protein.
  
     0.639
ALJ60451.1
Hypothetical protein.
  
     0.613
ALJ61652.1
Hypothetical protein.
  
     0.612
ALJ61651.1
Hypothetical protein.
  
     0.595
ALJ60046.1
Hypothetical protein.
  
     0.538
ALJ62057.1
Hypothetical protein.
  
     0.511
ALJ59508.1
Archaeal ATPase.
  
     0.479
ALJ61517.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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