Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59695.1MAC/Perforin domain protein. (468 aa)    
Predicted Functional Partners:
ALJ60385.1
Hypothetical protein.
  
     0.645
ALJ58438.1
Hypothetical protein.
  
     0.550
ALJ60864.1
Hypothetical protein.
  
     0.503
ALJ59403.1
Hypothetical protein.
  
     0.499
ALJ58433.1
Hypothetical protein.
 
   
 0.438
ugl_4
Unsaturated chondroitin disaccharide hydrolase.
  
     0.437
ALJ59696.1
Glycosyltransferase sugar-binding region containing DXD motif protein.
  
     0.412
ugl_2
Unsaturated chondroitin disaccharide hydrolase.
  
     0.409
ugl_3
Unsaturated chondroitin disaccharide hydrolase.
  
     0.404
ugl_6
Unsaturated chondroitin disaccharide hydrolase.
  
     0.402
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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