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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59710.1Hypothetical protein. (248 aa)    
Predicted Functional Partners:
tagB_1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
  
  
 0.855
ALJ59712.1
Hypothetical protein.
 
     0.784
ALJ59711.1
Lipopolysaccharide core biosynthesis protein.
  
  
 0.774
ALJ57469.1
Hypothetical protein.
 
  
 0.704
ALJ59708.1
Soluble hydrogenase 42 kDa subunit.
       0.696
tagD_2
Glycerol-3-phosphate cytidylyltransferase.
  
  
 0.690
hyaD
Hyaluronan synthase.
       0.646
ALJ61738.1
Cell division protein ZapA.
  
     0.606
epsJ_3
Putative glycosyltransferase EpsJ.
       0.600
pdxB
Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.
     
 0.595
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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