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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59719.1GH3 auxin-responsive promoter. (503 aa)    
Predicted Functional Partners:
pfkA_2
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
       0.711
ALJ57693.1
RNA polymerase Rpb6.
 
     0.710
ALJ60158.1
uroporphyrinogen-III synthase.
 
     0.673
ALJ62570.1
Hypothetical protein.
  
     0.668
exoX
Exodeoxyribonuclease 10.
  
     0.619
ALJ59747.1
Hypothetical protein.
 
     0.604
ALJ58658.1
Hypothetical protein.
  
     0.571
ALJ57651.1
Hypothetical protein.
  
     0.566
ALJ61164.1
Hypothetical protein.
 
     0.541
ALJ60409.1
Bacterial membrane protein YfhO.
  
     0.537
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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