Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ59725.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
btuB_6
Vitamin B12 transporter BtuB precursor.
 
   0.955
ALJ59724.1
Hypothetical protein.
  
 0.954
ALJ58766.1
Vitamin B12/cobalamin outer membrane transporter.
 
   0.839
ALJ59723.1
Receptor L domain protein.
 
 
   0.795
ALJ59722.1
Receptor L domain protein.
 
 
   0.746
ALJ62102.1
Hypothetical protein.
  
     0.639
ALJ59999.1
Hypothetical protein.
  
     0.632
ALJ62106.1
Hypothetical protein.
  
     0.547
hypBA2
Beta-L-arabinobiosidase precursor.
  
     0.544
ALJ62147.1
Hypothetical protein.
 
     0.543
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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