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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuB_6Vitamin B12 transporter BtuB precursor. (668 aa)    
Predicted Functional Partners:
ALJ59725.1
Hypothetical protein.
 
    0.944
ALJ59724.1
Hypothetical protein.
 
  
 0.938
ALJ59723.1
Receptor L domain protein.
 
   0.775
ALJ59722.1
Receptor L domain protein.
 
   0.731
ALJ58767.1
Hypothetical protein.
 
    0.704
ALJ62102.1
Hypothetical protein.
  
     0.609
ALJ59999.1
Hypothetical protein.
  
     0.606
ALJ62147.1
Hypothetical protein.
  
     0.555
ALJ62106.1
Hypothetical protein.
  
     0.539
lacZ_27
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.519
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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