STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nedA_1Sialidase precursor. (447 aa)    
Predicted Functional Partners:
ALJ60211.1
SusD family protein.
 
    0.924
ALJ60210.1
TonB dependent receptor.
 
    0.887
ALJ61940.1
Hypothetical protein.
  
     0.740
ALJ57624.1
Hypothetical protein.
  
     0.649
ALJ58252.1
Hypothetical protein.
  
     0.627
ALJ59893.1
SusD family protein.
 
    0.610
ALJ58168.1
SusD family protein.
 
     0.598
ALJ61928.1
Transcriptional activator FtrA.
 
   
 0.588
ALJ62643.1
Hypothetical protein; VirE N-terminal domain.
  
     0.569
ALJ61558.1
Hypothetical protein; VirE N-terminal domain.
  
     0.565
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.