STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60233.1DNA-binding transcriptional regulator SoxS. (294 aa)    
Predicted Functional Partners:
ALJ60230.1
Hypothetical protein.
 
     0.728
ALJ60232.1
Hypothetical protein.
       0.637
ALJ62245.1
Hypothetical protein.
  
     0.566
resA_3
Thiol-disulfide oxidoreductase ResA.
 
     0.560
ALJ60231.1
Hypothetical protein.
       0.482
ALJ61662.1
Hypothetical protein.
  
    0.466
ALJ58221.1
Glycosyl hydrolase family 10.
  
     0.459
ALJ62341.1
Putative transporter.
 
   
 0.452
ALJ59846.1
Hypothetical protein.
 
     0.442
ALJ61166.1
Hypothetical protein.
  
    0.432
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.