Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALJ60263.1Reducing end xylose-releasing exo-oligoxylanase. (419 aa)    
Predicted Functional Partners:
xyl3A_4
Xylan 1,4-beta-xylosidase precursor.
 
   
 0.734
xynB_1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.679
ALJ60077.1
Glycosyl hydrolases family 43.
 
   
 0.639
ALJ59085.1
Endo-1,4-beta-xylanase/feruloyl esterase precursor.
 
     0.592
ALJ60149.1
Hypothetical protein; N-terminal ig-like domain of cellulase.
  
   
 0.592
ALJ59535.1
Hypothetical protein.
 
   
 0.577
xynB_5
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.540
xynB_4
Beta-xylosidase.
 
   
 0.539
ALJ59344.1
Hypothetical protein.
 
   
 0.514
hypBA1_1
Non-reducing end beta-L-arabinofuranosidase.
 
   
 0.490
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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