Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ58622.1 | sglT_3 | BcellWH2_01361 | BcellWH2_03033 | Sodium Bile acid symporter family protein. | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.482 |
ALJ60272.1 | ALJ60274.1 | BcellWH2_03034 | BcellWH2_03036 | Beta-1,4-mannooligosaccharide phosphorylase. | SusD family protein. | 0.732 |
ALJ60272.1 | btr_3 | BcellWH2_03034 | BcellWH2_03032 | Beta-1,4-mannooligosaccharide phosphorylase. | HTH-type transcriptional activator Btr. | 0.659 |
ALJ60272.1 | btuB_7 | BcellWH2_03034 | BcellWH2_03035 | Beta-1,4-mannooligosaccharide phosphorylase. | Vitamin B12 transporter BtuB. | 0.708 |
ALJ60272.1 | sglT_3 | BcellWH2_03034 | BcellWH2_03033 | Beta-1,4-mannooligosaccharide phosphorylase. | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.693 |
ALJ60274.1 | ALJ60272.1 | BcellWH2_03036 | BcellWH2_03034 | SusD family protein. | Beta-1,4-mannooligosaccharide phosphorylase. | 0.732 |
ALJ60274.1 | btr_3 | BcellWH2_03036 | BcellWH2_03032 | SusD family protein. | HTH-type transcriptional activator Btr. | 0.518 |
ALJ60274.1 | btuB_7 | BcellWH2_03036 | BcellWH2_03035 | SusD family protein. | Vitamin B12 transporter BtuB. | 0.941 |
ALJ60274.1 | sglT_3 | BcellWH2_03036 | BcellWH2_03033 | SusD family protein. | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.515 |
btr_3 | ALJ60272.1 | BcellWH2_03032 | BcellWH2_03034 | HTH-type transcriptional activator Btr. | Beta-1,4-mannooligosaccharide phosphorylase. | 0.659 |
btr_3 | ALJ60274.1 | BcellWH2_03032 | BcellWH2_03036 | HTH-type transcriptional activator Btr. | SusD family protein. | 0.518 |
btr_3 | btuB_7 | BcellWH2_03032 | BcellWH2_03035 | HTH-type transcriptional activator Btr. | Vitamin B12 transporter BtuB. | 0.486 |
btr_3 | sglT_3 | BcellWH2_03032 | BcellWH2_03033 | HTH-type transcriptional activator Btr. | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.590 |
btuB_7 | ALJ60272.1 | BcellWH2_03035 | BcellWH2_03034 | Vitamin B12 transporter BtuB. | Beta-1,4-mannooligosaccharide phosphorylase. | 0.708 |
btuB_7 | ALJ60274.1 | BcellWH2_03035 | BcellWH2_03036 | Vitamin B12 transporter BtuB. | SusD family protein. | 0.941 |
btuB_7 | btr_3 | BcellWH2_03035 | BcellWH2_03032 | Vitamin B12 transporter BtuB. | HTH-type transcriptional activator Btr. | 0.486 |
btuB_7 | sglT_3 | BcellWH2_03035 | BcellWH2_03033 | Vitamin B12 transporter BtuB. | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.565 |
sglT_3 | ALJ58622.1 | BcellWH2_03033 | BcellWH2_01361 | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Sodium Bile acid symporter family protein. | 0.482 |
sglT_3 | ALJ60272.1 | BcellWH2_03033 | BcellWH2_03034 | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Beta-1,4-mannooligosaccharide phosphorylase. | 0.693 |
sglT_3 | ALJ60274.1 | BcellWH2_03033 | BcellWH2_03036 | Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | SusD family protein. | 0.515 |
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