Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zraR_5Transcriptional regulatory protein ZraR. (440 aa)    
Predicted Functional Partners:
evgS_2
Sensor protein EvgS precursor.
 
 
 0.932
zraR_2
Transcriptional regulatory protein ZraR.
  
  
 
0.907
zraR_6
Transcriptional regulatory protein ZraR.
  
  
 
0.906
tetM
Tetracycline resistance protein TetM.
 
     0.866
rpoN
RNA polymerase sigma-54 factor.
 
  
 0.784
ALJ60297.1
Hypothetical protein.
       0.589
ALJ60309.1
Hypothetical protein.
  
     0.553
ALJ60307.1
Hypothetical protein.
  
     0.456
ALJ58560.1
PD-(D/E)XK nuclease family transposase.
 
  
 0.443
ALJ60304.1
Hypothetical protein.
  
    0.443
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.