STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csxA_5Exo-beta-D-glucosaminidase precursor; Belongs to the glycosyl hydrolase 2 family. (899 aa)    
Predicted Functional Partners:
csxA_6
Exo-beta-D-glucosaminidase precursor.
 
    
0.832
cslA_5
Chondroitinase-AC precursor.
  
  
 0.764
ALJ60385.1
Hypothetical protein.
     
 0.759
cslA_6
Chondroitinase-AC precursor.
  
 
 0.730
cslA_4
Chondroitinase-AC precursor.
       0.711
ugl_4
Unsaturated chondroitin disaccharide hydrolase.
       0.711
pehX_7
Exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
     
 0.677
lacZ_26
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.562
ALJ60827.1
Hypothetical protein.
  
     0.534
nedA_1
Sialidase precursor.
  
  
 0.520
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.