STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZ_17Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (928 aa)    
Predicted Functional Partners:
ALJ60398.1
Heparinase II/III-like protein.
 
  
 0.911
yesR_6
Unsaturated rhamnogalacturonyl hydrolase YesR.
 
     0.862
ALJ60406.1
Tetratricopeptide repeat protein.
 
   
 0.796
xynC_3
Glucuronoxylanase XynC precursor.
 
  
 0.735
btr_4
HTH-type transcriptional activator Btr.
 
   
 0.712
bga_2
Beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
 
 
 0.693
uidA_1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
    
0.586
ALJ60400.1
Hypothetical protein.
       0.530
ALJ60403.1
SusD family protein.
 
     0.525
ALJ59966.1
O-Glycosyl hydrolase family 30.
 
  
 0.510
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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