Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
arcB_2 | bvgS_5 | BcellWH2_00331 | BcellWH2_04954 | Aerobic respiration control sensor protein ArcB. | Virulence sensor protein BvgS precursor. | 0.961 |
arcB_2 | divK | BcellWH2_00331 | BcellWH2_01503 | Aerobic respiration control sensor protein ArcB. | Polar-differentiation response regulator DivK. | 0.987 |
arcB_2 | evgS_3 | BcellWH2_00331 | BcellWH2_03550 | Aerobic respiration control sensor protein ArcB. | Sensor protein EvgS precursor. | 0.974 |
arcB_2 | luxQ_5 | BcellWH2_00331 | BcellWH2_03174 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.967 |
arcB_2 | luxQ_8 | BcellWH2_00331 | BcellWH2_03665 | Aerobic respiration control sensor protein ArcB. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.963 |
arcB_2 | pleC_1 | BcellWH2_00331 | BcellWH2_01942 | Aerobic respiration control sensor protein ArcB. | Non-motile and phage-resistance protein. | 0.958 |
arcB_2 | pleC_3 | BcellWH2_00331 | BcellWH2_02394 | Aerobic respiration control sensor protein ArcB. | Non-motile and phage-resistance protein. | 0.969 |
arcB_2 | rpfC_2 | BcellWH2_00331 | BcellWH2_03140 | Aerobic respiration control sensor protein ArcB. | Sensory/regulatory protein RpfC. | 0.954 |
arcB_2 | todS_4 | BcellWH2_00331 | BcellWH2_01330 | Aerobic respiration control sensor protein ArcB. | Sensor histidine kinase TodS. | 0.993 |
bvgS_5 | arcB_2 | BcellWH2_04954 | BcellWH2_00331 | Virulence sensor protein BvgS precursor. | Aerobic respiration control sensor protein ArcB. | 0.961 |
bvgS_5 | divK | BcellWH2_04954 | BcellWH2_01503 | Virulence sensor protein BvgS precursor. | Polar-differentiation response regulator DivK. | 0.988 |
bvgS_5 | evgS_3 | BcellWH2_04954 | BcellWH2_03550 | Virulence sensor protein BvgS precursor. | Sensor protein EvgS precursor. | 0.991 |
bvgS_5 | luxQ_5 | BcellWH2_04954 | BcellWH2_03174 | Virulence sensor protein BvgS precursor. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.964 |
bvgS_5 | luxQ_8 | BcellWH2_04954 | BcellWH2_03665 | Virulence sensor protein BvgS precursor. | Autoinducer 2 sensor kinase/phosphatase LuxQ. | 0.955 |
bvgS_5 | pleC_1 | BcellWH2_04954 | BcellWH2_01942 | Virulence sensor protein BvgS precursor. | Non-motile and phage-resistance protein. | 0.960 |
bvgS_5 | pleC_3 | BcellWH2_04954 | BcellWH2_02394 | Virulence sensor protein BvgS precursor. | Non-motile and phage-resistance protein. | 0.989 |
bvgS_5 | rpfC_2 | BcellWH2_04954 | BcellWH2_03140 | Virulence sensor protein BvgS precursor. | Sensory/regulatory protein RpfC. | 0.961 |
bvgS_5 | todS_4 | BcellWH2_04954 | BcellWH2_01330 | Virulence sensor protein BvgS precursor. | Sensor histidine kinase TodS. | 0.994 |
divK | arcB_2 | BcellWH2_01503 | BcellWH2_00331 | Polar-differentiation response regulator DivK. | Aerobic respiration control sensor protein ArcB. | 0.987 |
divK | bvgS_5 | BcellWH2_01503 | BcellWH2_04954 | Polar-differentiation response regulator DivK. | Virulence sensor protein BvgS precursor. | 0.988 |
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