STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60466.1Putative CtpA-like serine protease; Belongs to the peptidase S41A family. (585 aa)    
Predicted Functional Partners:
ydjH_3
Putative sugar kinase YdjH; Belongs to the carbohydrate kinase PfkB family.
       0.836
ALJ60467.1
Two component regulator propeller.
       0.501
ALJ60462.1
DNA utilization protein GntX.
 
     0.482
mltD_1
Membrane-bound lytic murein transglycosylase D precursor.
 
   
 0.477
ALJ59573.1
Tetratricopeptide repeat protein.
 
    0.461
amiA
N-acetylmuramoyl-L-alanine amidase AmiA precursor.
 
  
 0.431
mrdB
Rod shape-determining protein RodA; Belongs to the SEDS family.
 
   0.410
pheT
Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.402
mepM_1
Murein DD-endopeptidase MepM.
 
 
 
 0.400
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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