STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60486.1TonB dependent receptor. (1052 aa)    
Predicted Functional Partners:
ALJ60487.1
SusD family protein.
 
    0.931
ALJ59759.1
SusD family protein.
 
    0.788
ALJ60870.1
SusD family protein.
 
     0.771
ALJ58955.1
SusD family protein.
 
     0.767
ALJ60823.1
SusD family protein.
  
     0.767
ALJ58825.1
SusD family protein.
 
    0.765
ALJ58361.1
SusD family protein.
 
     0.764
ALJ59762.1
SusD family protein.
 
     0.751
ALJ58427.1
SusD family protein.
 
     0.747
ALJ58443.1
SusD family protein.
 
     0.745
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.