Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60489.1Hypothetical protein. (811 aa)    
Predicted Functional Partners:
ALJ60490.1
Hypothetical protein.
 
     0.828
ALJ60499.1
FAD dependent oxidoreductase.
 
     0.807
sglT_4
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.802
ALJ60491.1
Alpha-L-fucosidase.
       0.751
celE
Endoglucanase E precursor.
   
 
 0.740
ALJ60487.1
SusD family protein.
 
 
   0.724
ALJ60488.1
Hypothetical protein.
       0.714
axeA1_2
Acetylxylan esterase precursor.
       0.662
ALJ60493.1
Hypothetical protein.
       0.652
bglB_2
Thermostable beta-glucosidase B.
       0.601
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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