Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gldNHypothetical protein. (339 aa)    
Predicted Functional Partners:
pkn1_2
Serine/threonine-protein kinase pkn1.
 
 
 
 0.972
ALJ60615.1
Hypothetical protein; GldM N-terminal domain.
 
   
 0.949
gldL
Hypothetical protein.
 
   
 0.922
ALJ60612.1
Hypothetical protein.
 
   
 0.897
ALJ58666.1
Hypothetical protein.
  
   
 0.823
ALJ59190.1
Hypothetical protein.
 
   
 0.800
ALJ60617.1
Hypothetical protein.
 
     0.792
ALJ61081.1
Tetratricopeptide repeat protein.
  
   
 0.785
ALJ59118.1
Hypothetical protein.
  
   
 0.782
ALJ58457.1
Formylglycine-generating sulfatase enzyme.
   
 
 0.768
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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