Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (659 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
 
 
 0.999
hutH_1
Histidine ammonia-lyase.
 
 0.998
hutH_2
Histidine ammonia-lyase.
  
 0.954
ftcD
Hypothetical protein; Formiminotransferase domain, N-terminal subdomain.
 
  
 0.950
fchA
Methenyltetrahydrofolate cyclohydrolase.
 
     0.794
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.573
ALJ60678.1
Hypothetical protein.
       0.558
arg
Arginase; Belongs to the arginase family.
  
  
 0.507
kstR2_1
HTH-type transcriptional repressor KstR2.
       0.479
tolC_1
Outer membrane protein TolC precursor.
     
 0.429
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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