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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (659 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase.
 
 
 0.999
hutH_1
Histidine ammonia-lyase.
 
 0.998
ftcD
Hypothetical protein; Formiminotransferase domain, N-terminal subdomain.
 
  
 0.954
hutH_2
Histidine ammonia-lyase.
  
 0.948
fchA
Methenyltetrahydrofolate cyclohydrolase.
 
     0.819
ALJ60678.1
Hypothetical protein.
       0.562
kstR2_1
HTH-type transcriptional repressor KstR2.
       0.468
arg
Arginase; Belongs to the arginase family.
  
  
 0.435
tolC_1
Outer membrane protein TolC precursor.
     
 0.413
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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