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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiA1_2Chitinase A1 precursor; Belongs to the glycosyl hydrolase 18 family. (345 aa)    
Predicted Functional Partners:
ALJ60699.1
Hypothetical protein.
       0.737
ALJ60700.1
Starch-binding associating with outer membrane.
 
     0.703
fepA_5
Ferrienterobactin receptor precursor.
       0.629
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
   
 0.580
exo-4
Beta-hexosaminidase.
 
  
 0.529
xylR_3
Xylose operon regulatory protein.
       0.501
pqqL_5
Peptidase M16 inactive domain protein; Belongs to the peptidase M16 family.
 
 
 
 0.475
ALJ60693.1
Glycosyl hydrolase family 20, catalytic domain.
  
  
 0.471
eglS
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.457
nagB_3
Glucosamine-6-phosphate deaminase.
     
 0.452
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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