Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALJ60700.1Starch-binding associating with outer membrane. (529 aa)    
Predicted Functional Partners:
fepA_5
Ferrienterobactin receptor precursor.
 
  
 0.948
ALJ60734.1
TonB-dependent Receptor Plug Domain protein.
 
 
 0.889
fepA_4
Ferrienterobactin receptor precursor.
 
  
 0.793
ALJ60530.1
TonB dependent receptor.
 
  
 0.780
fepA_1
Ferrienterobactin receptor precursor.
 
  
 0.770
pfeA_6
Ferric enterobactin receptor precursor.
 
  
 0.733
ALJ59518.1
SusD family protein.
  
 
 
 0.723
ALJ60150.1
SusD family protein.
  
 
 
 0.715
ALJ60823.1
SusD family protein.
  
 
   0.715
ALJ60713.1
SusD family protein.
  
 
 0.708
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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