Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
xylR_3Xylose operon regulatory protein. (398 aa)    
Predicted Functional Partners:
gltB_2
Ferredoxin-dependent glutamate synthase 1.
   
 
 0.754
fepA_5
Ferrienterobactin receptor precursor.
     
 0.611
araC_5
Arabinose operon regulatory protein.
 
 
 0.610
ALJ60700.1
Starch-binding associating with outer membrane.
       0.592
btr_3
HTH-type transcriptional activator Btr.
 
 
 0.583
ALJ60553.1
ADP-ribosylglycohydrolase.
 
     0.582
ALJ58011.1
ADP-ribosylglycohydrolase.
 
     0.579
ALJ58000.1
ADP-ribosylglycohydrolase.
 
     0.572
nylB'_1
6-aminohexanoate-dimer hydrolase.
 
   
 0.542
ALJ60699.1
Hypothetical protein.
       0.524
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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