Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60716.1Virulence-associated protein E. (440 aa)    
Predicted Functional Partners:
ALJ62090.1
Phosphate-selective porin O and P.
  
     0.728
rutC
Putative aminoacrylate peracid reductase RutC.
  
     0.677
ALJ61797.1
Hypothetical protein.
  
     0.665
ALJ57505.1
Divergent AAA domain protein.
  
     0.632
irpA
Iron-regulated protein A precursor.
  
     0.619
ALJ62087.1
Hypothetical protein.
  
     0.605
ALJ60124.1
Hypothetical protein.
  
     0.573
ALJ61885.1
Hypothetical protein.
  
     0.548
ALJ59506.1
Hypothetical protein.
  
     0.542
ALJ62742.1
Bacteriophage Lambda NinG protein.
  
     0.519
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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