Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALJ60719.1Colicin uptake protein TolQ. (270 aa)    
Predicted Functional Partners:
exbD
Biopolymer transport protein ExbD/TolR.
 
 
 0.974
ALJ60721.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.971
ALJ60722.1
Transport protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
 
 0.941
pstS1
Phosphate-binding protein PstS 1 precursor.
 
  
 0.925
ALJ60724.1
Tetratricopeptide repeat protein.
 
  
 0.903
ALJ58782.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.607
ALJ58783.1
Biopolymer transport protein ExbD/TolR.
  
 
 0.586
ALJ59021.1
Colicin uptake protein TolR.
  
 
 0.586
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
 
   
 0.508
ALJ59925.1
Gram-negative bacterial tonB protein.
  
 
 0.503
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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