STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kstR2_2HTH-type transcriptional repressor KstR2. (220 aa)    
Predicted Functional Partners:
truC
tRNA pseudouridine synthase C.
  
  
 0.814
fabG_4
3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.810
ALJ58173.1
Sporulation related domain protein.
  
   
 0.570
ALJ58539.1
Photosystem I assembly protein Ycf3.
  
   
 0.544
ALJ61825.1
Anaphase-promoting complex, cyclosome, subunit 3.
 
   
 0.541
ALJ61463.1
Hypothetical protein.
  
     0.529
ALJ61385.1
Hypothetical protein.
  
     0.514
ALJ58947.1
Hypothetical protein.
 
     0.510
ALJ61739.1
Hypothetical protein.
  
     0.501
ALJ59506.1
Hypothetical protein.
  
     0.499
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.