STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60856.1TonB dependent receptor. (1006 aa)    
Predicted Functional Partners:
ALJ60857.1
SusD family protein.
 
     0.941
ALJ58008.1
SusD family protein.
 
    0.783
ALJ58166.1
SusD family protein.
 
    0.783
ALJ59174.1
SusD family protein.
 
     0.778
ALJ59243.1
SusD family protein.
 
     0.777
ALJ61531.1
SusD family protein.
 
     0.777
ALJ58916.1
SusD family protein.
 
    0.776
ALJ59602.1
SusD family protein.
 
     0.775
ALJ60823.1
SusD family protein.
 
     0.774
ALJ60855.1
Hypothetical protein.
       0.773
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.