STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ60865.1Hypothetical protein. (465 aa)    
Predicted Functional Partners:
ALJ60864.1
Hypothetical protein.
 
     0.809
ALJ60866.1
Glycosyl hydrolase family 92.
      0.692
bglX_15
Periplasmic beta-glucosidase precursor.
     
 0.690
axeA1_2
Acetylxylan esterase precursor.
 
  
 0.625
axeA1_4
Acetylxylan esterase precursor.
 
     0.507
axeA1_5
Acetylxylan esterase precursor.
 
     0.429
ALJ60863.1
Hypothetical protein.
 
    
0.421
axeA
Cephalosporin-C deacetylase.
 
     0.420
ALJ62100.1
Glycosyl hydrolases family 2, sugar binding domain.
 
 
 0.418
ALJ60872.1
Pectate lyase superfamily protein.
 
 
 0.408
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.