Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ57379.1 | ALJ60913.1 | BcellWH2_00103 | BcellWH2_03690 | Site-specific tyrosine recombinase XerC. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.639 |
ALJ57379.1 | ALJ61626.1 | BcellWH2_00103 | BcellWH2_04409 | Site-specific tyrosine recombinase XerC. | Site-specific tyrosine recombinase XerC. | 0.695 |
ALJ57379.1 | ALJ62118.1 | BcellWH2_00103 | BcellWH2_04909 | Site-specific tyrosine recombinase XerC. | Helix-turn-helix domain protein. | 0.406 |
ALJ57379.1 | ALJ62300.1 | BcellWH2_00103 | BcellWH2_05092 | Site-specific tyrosine recombinase XerC. | Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.526 |
ALJ57379.1 | xerD_1 | BcellWH2_00103 | BcellWH2_00102 | Site-specific tyrosine recombinase XerC. | Tyrosine recombinase XerD. | 0.812 |
ALJ59369.1 | ALJ60913.1 | BcellWH2_02126 | BcellWH2_03690 | Helix-turn-helix domain protein. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.615 |
ALJ59369.1 | ALJ60928.1 | BcellWH2_02126 | BcellWH2_03705 | Helix-turn-helix domain protein. | Site-specific tyrosine recombinase XerC. | 0.438 |
ALJ59369.1 | ALJ61626.1 | BcellWH2_02126 | BcellWH2_04409 | Helix-turn-helix domain protein. | Site-specific tyrosine recombinase XerC. | 0.493 |
ALJ59369.1 | ALJ62300.1 | BcellWH2_02126 | BcellWH2_05092 | Helix-turn-helix domain protein. | Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.453 |
ALJ59369.1 | xerC_2 | BcellWH2_02126 | BcellWH2_00888 | Helix-turn-helix domain protein. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.752 |
ALJ59369.1 | xerD_12 | BcellWH2_02126 | BcellWH2_04927 | Helix-turn-helix domain protein. | Tyrosine recombinase XerD. | 0.721 |
ALJ60913.1 | ALJ57379.1 | BcellWH2_03690 | BcellWH2_00103 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC. | 0.639 |
ALJ60913.1 | ALJ59369.1 | BcellWH2_03690 | BcellWH2_02126 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Helix-turn-helix domain protein. | 0.615 |
ALJ60913.1 | ALJ60928.1 | BcellWH2_03690 | BcellWH2_03705 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC. | 0.710 |
ALJ60913.1 | ALJ61626.1 | BcellWH2_03690 | BcellWH2_04409 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC. | 0.631 |
ALJ60913.1 | ALJ61806.1 | BcellWH2_03690 | BcellWH2_04591 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.503 |
ALJ60913.1 | ALJ62118.1 | BcellWH2_03690 | BcellWH2_04909 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Helix-turn-helix domain protein. | 0.664 |
ALJ60913.1 | ALJ62300.1 | BcellWH2_03690 | BcellWH2_05092 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.554 |
ALJ60913.1 | xerC_2 | BcellWH2_03690 | BcellWH2_00888 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.582 |
ALJ60913.1 | xerD_1 | BcellWH2_03690 | BcellWH2_00102 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Tyrosine recombinase XerD. | 0.654 |
page 1 of 3