Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ57321.1 | ALJ60928.1 | BcellWH2_00044 | BcellWH2_03705 | Hypothetical protein. | Site-specific tyrosine recombinase XerC. | 0.573 |
ALJ57321.1 | ALJ61206.1 | BcellWH2_00044 | BcellWH2_03986 | Hypothetical protein. | Phage integrase family protein. | 0.754 |
ALJ57321.1 | ALJ61716.1 | BcellWH2_00044 | BcellWH2_04500 | Hypothetical protein. | Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family. | 0.767 |
ALJ57321.1 | ALJ61804.1 | BcellWH2_00044 | BcellWH2_04589 | Hypothetical protein. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.766 |
ALJ57321.1 | ALJ62118.1 | BcellWH2_00044 | BcellWH2_04909 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.545 |
ALJ57406.1 | ALJ60928.1 | BcellWH2_00130 | BcellWH2_03705 | Hypothetical protein; DUF based on B. Theta Gene description. | Site-specific tyrosine recombinase XerC. | 0.445 |
ALJ57406.1 | ALJ61621.1 | BcellWH2_00130 | BcellWH2_04404 | Hypothetical protein; DUF based on B. Theta Gene description. | Relaxase/mobilization nuclease domain protein. | 0.532 |
ALJ58675.1 | ALJ60928.1 | BcellWH2_01414 | BcellWH2_03705 | Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC. | 0.679 |
ALJ58675.1 | ALJ62118.1 | BcellWH2_01414 | BcellWH2_04909 | Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family. | Helix-turn-helix domain protein. | 0.525 |
ALJ60913.1 | ALJ60928.1 | BcellWH2_03690 | BcellWH2_03705 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Site-specific tyrosine recombinase XerC. | 0.710 |
ALJ60913.1 | ALJ62118.1 | BcellWH2_03690 | BcellWH2_04909 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Helix-turn-helix domain protein. | 0.664 |
ALJ60928.1 | ALJ57321.1 | BcellWH2_03705 | BcellWH2_00044 | Site-specific tyrosine recombinase XerC. | Hypothetical protein. | 0.573 |
ALJ60928.1 | ALJ57406.1 | BcellWH2_03705 | BcellWH2_00130 | Site-specific tyrosine recombinase XerC. | Hypothetical protein; DUF based on B. Theta Gene description. | 0.445 |
ALJ60928.1 | ALJ58675.1 | BcellWH2_03705 | BcellWH2_01414 | Site-specific tyrosine recombinase XerC. | Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family. | 0.679 |
ALJ60928.1 | ALJ60913.1 | BcellWH2_03705 | BcellWH2_03690 | Site-specific tyrosine recombinase XerC. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.710 |
ALJ60928.1 | ALJ61206.1 | BcellWH2_03705 | BcellWH2_03986 | Site-specific tyrosine recombinase XerC. | Phage integrase family protein. | 0.495 |
ALJ60928.1 | ALJ61621.1 | BcellWH2_03705 | BcellWH2_04404 | Site-specific tyrosine recombinase XerC. | Relaxase/mobilization nuclease domain protein. | 0.442 |
ALJ60928.1 | ALJ61716.1 | BcellWH2_03705 | BcellWH2_04500 | Site-specific tyrosine recombinase XerC. | Site-specific tyrosine recombinase XerD; Belongs to the 'phage' integrase family. | 0.677 |
ALJ60928.1 | ALJ61804.1 | BcellWH2_03705 | BcellWH2_04589 | Site-specific tyrosine recombinase XerC. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.645 |
ALJ60928.1 | ALJ61973.1 | BcellWH2_03705 | BcellWH2_04762 | Site-specific tyrosine recombinase XerC. | Site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family. | 0.710 |
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