Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ58753.1 | ALJ60994.1 | BcellWH2_01498 | BcellWH2_03772 | Hypothetical protein. | Ankyrin repeats (3 copies). | 0.843 |
ALJ58753.1 | ALJ61060.1 | BcellWH2_01498 | BcellWH2_03838 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.571 |
ALJ58753.1 | alaS_1 | BcellWH2_01498 | BcellWH2_03895 | Hypothetical protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.694 |
ALJ58753.1 | rpoA | BcellWH2_01498 | BcellWH2_03444 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.754 |
ALJ58753.1 | rpoB | BcellWH2_01498 | BcellWH2_03410 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.786 |
ALJ59853.1 | ALJ61060.1 | BcellWH2_02614 | BcellWH2_03838 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.631 |
ALJ60054.1 | ALJ60994.1 | BcellWH2_02815 | BcellWH2_03772 | Eukaryotic translation initiation factor eIF2A. | Ankyrin repeats (3 copies). | 0.821 |
ALJ60054.1 | ALJ61060.1 | BcellWH2_02815 | BcellWH2_03838 | Eukaryotic translation initiation factor eIF2A. | Tetratricopeptide repeat protein. | 0.538 |
ALJ60054.1 | alaS_1 | BcellWH2_02815 | BcellWH2_03895 | Eukaryotic translation initiation factor eIF2A. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.684 |
ALJ60054.1 | rpoA | BcellWH2_02815 | BcellWH2_03444 | Eukaryotic translation initiation factor eIF2A. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.740 |
ALJ60054.1 | rpoB | BcellWH2_02815 | BcellWH2_03410 | Eukaryotic translation initiation factor eIF2A. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.692 |
ALJ60994.1 | ALJ58753.1 | BcellWH2_03772 | BcellWH2_01498 | Ankyrin repeats (3 copies). | Hypothetical protein. | 0.843 |
ALJ60994.1 | ALJ60054.1 | BcellWH2_03772 | BcellWH2_02815 | Ankyrin repeats (3 copies). | Eukaryotic translation initiation factor eIF2A. | 0.821 |
ALJ60994.1 | ALJ61060.1 | BcellWH2_03772 | BcellWH2_03838 | Ankyrin repeats (3 copies). | Tetratricopeptide repeat protein. | 0.562 |
ALJ60994.1 | alaS_1 | BcellWH2_03772 | BcellWH2_03895 | Ankyrin repeats (3 copies). | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.525 |
ALJ60994.1 | dnaK | BcellWH2_03772 | BcellWH2_04657 | Ankyrin repeats (3 copies). | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.726 |
ALJ60994.1 | htpG | BcellWH2_03772 | BcellWH2_05356 | Ankyrin repeats (3 copies). | Chaperone protein HtpG. | 0.602 |
ALJ60994.1 | rpoB | BcellWH2_03772 | BcellWH2_03410 | Ankyrin repeats (3 copies). | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.451 |
ALJ61060.1 | ALJ58753.1 | BcellWH2_03838 | BcellWH2_01498 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.571 |
ALJ61060.1 | ALJ59853.1 | BcellWH2_03838 | BcellWH2_02614 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.631 |
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