Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALJ60043.1 | ALJ60119.1 | BcellWH2_02804 | BcellWH2_02880 | Hypothetical protein. | Hypothetical protein. | 0.760 |
ALJ60043.1 | ALJ61334.1 | BcellWH2_02804 | BcellWH2_04114 | Hypothetical protein. | Plasmid pRiA4b ORF-3-like protein. | 0.731 |
ALJ60043.1 | ALJ62547.1 | BcellWH2_02804 | BcellWH2_05345 | Hypothetical protein. | Hypothetical protein. | 0.635 |
ALJ60043.1 | rlmH | BcellWH2_02804 | BcellWH2_05119 | Hypothetical protein. | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.434 |
ALJ60043.1 | rsmD | BcellWH2_02804 | BcellWH2_03890 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase D. | 0.684 |
ALJ60119.1 | ALJ60043.1 | BcellWH2_02880 | BcellWH2_02804 | Hypothetical protein. | Hypothetical protein. | 0.760 |
ALJ60119.1 | ALJ61334.1 | BcellWH2_02880 | BcellWH2_04114 | Hypothetical protein. | Plasmid pRiA4b ORF-3-like protein. | 0.768 |
ALJ60119.1 | ALJ62547.1 | BcellWH2_02880 | BcellWH2_05345 | Hypothetical protein. | Hypothetical protein. | 0.639 |
ALJ60119.1 | rlmH | BcellWH2_02880 | BcellWH2_05119 | Hypothetical protein. | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. | 0.453 |
ALJ60119.1 | rsmD | BcellWH2_02880 | BcellWH2_03890 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase D. | 0.698 |
ALJ61112.1 | ALJ61113.1 | BcellWH2_03891 | BcellWH2_03892 | Hypothetical protein. | Hypothetical protein. | 0.901 |
ALJ61112.1 | recD2_2 | BcellWH2_03891 | BcellWH2_03893 | Hypothetical protein. | ATP-dependent RecD-like DNA helicase. | 0.772 |
ALJ61112.1 | rsmD | BcellWH2_03891 | BcellWH2_03890 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase D. | 0.822 |
ALJ61113.1 | ALJ61112.1 | BcellWH2_03892 | BcellWH2_03891 | Hypothetical protein. | Hypothetical protein. | 0.901 |
ALJ61113.1 | recD2_2 | BcellWH2_03892 | BcellWH2_03893 | Hypothetical protein. | ATP-dependent RecD-like DNA helicase. | 0.768 |
ALJ61113.1 | rsmD | BcellWH2_03892 | BcellWH2_03890 | Hypothetical protein. | Ribosomal RNA small subunit methyltransferase D. | 0.791 |
ALJ61334.1 | ALJ60043.1 | BcellWH2_04114 | BcellWH2_02804 | Plasmid pRiA4b ORF-3-like protein. | Hypothetical protein. | 0.731 |
ALJ61334.1 | ALJ60119.1 | BcellWH2_04114 | BcellWH2_02880 | Plasmid pRiA4b ORF-3-like protein. | Hypothetical protein. | 0.768 |
ALJ61334.1 | ALJ62547.1 | BcellWH2_04114 | BcellWH2_05345 | Plasmid pRiA4b ORF-3-like protein. | Hypothetical protein. | 0.538 |
ALJ61334.1 | rsmD | BcellWH2_04114 | BcellWH2_03890 | Plasmid pRiA4b ORF-3-like protein. | Ribosomal RNA small subunit methyltransferase D. | 0.530 |
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