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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accD5_1Putative propionyl-CoA carboxylase beta chain 5. (517 aa)    
Predicted Functional Partners:
gcdC_1
Glutaconyl-CoA decarboxylase subunit gamma.
 
 0.981
mce
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
 
 
 0.964
gcdC_2
Glutaconyl-CoA decarboxylase subunit gamma.
 
 0.916
accC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.881
ALJ61644.1
Hypothetical protein.
  
    0.806
gcdB_2
Glutaconyl-CoA decarboxylase subunit beta.
  
  
 0.788
birA
Bifunctional ligase/repressor BirA.
 
 
 0.744
mutB
Methylmalonyl-CoA mutase large subunit.
 
  
 0.620
mutA
Methylmalonyl-CoA mutase small subunit.
 
  
 0.595
fumB
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.575
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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