Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61651.1Hypothetical protein. (413 aa)    
Predicted Functional Partners:
ALJ62057.1
Hypothetical protein.
  
     0.616
ALJ59691.1
Hypothetical protein.
  
     0.595
ALJ61377.1
Hypothetical protein.
  
     0.568
ALJ61876.1
Divergent AAA domain protein.
  
     0.534
ALJ59508.1
Archaeal ATPase.
  
     0.508
ALJ58371.1
Hypothetical protein.
  
     0.487
ALJ62056.1
Hypothetical protein.
  
     0.479
ALJ60570.1
Hypothetical protein.
  
     0.455
ALJ59472.1
Hypothetical protein.
  
     0.435
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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