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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61682.1Hypothetical protein. (420 aa)    
Predicted Functional Partners:
ALJ61686.1
Hypothetical protein.
 
   
 0.855
coaX
Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
       0.798
ALJ58855.1
Hypothetical protein.
 
   
 0.779
ALJ59748.1
Hypothetical protein.
  
    0.767
lptC
Lipopolysaccharide-assembly, LptC-related.
 
    0.762
ALJ58230.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.751
ALJ60176.1
Hypothetical protein.
 
     0.748
ALJ61145.1
Hypothetical protein.
  
     0.746
bamD
Outer membrane protein assembly factor BamD.
 
   
 0.743
ALJ61683.1
Tetratricopeptide repeat protein.
 
     0.734
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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