Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ALJ61683.1Tetratricopeptide repeat protein. (438 aa)    
Predicted Functional Partners:
ALJ61688.1
Hypothetical protein.
 
    0.868
lptC
Lipopolysaccharide-assembly, LptC-related.
 
     0.867
tlyC
Hemolysin C.
 
     0.840
coaX
Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.
 
     0.782
ALJ58783.1
Biopolymer transport protein ExbD/TolR.
 
   
 0.780
ALJ58782.1
Biopolymer transport protein ExbD/TolR.
 
   
 0.778
ALJ61113.1
Hypothetical protein.
  
     0.773
ALJ61686.1
Hypothetical protein.
 
 
   0.751
tonB_Cterm
Hypothetical protein.
 
   
 0.733
ALJ61682.1
Hypothetical protein.
 
     0.730
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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