STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61688.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
ALJ61683.1
Tetratricopeptide repeat protein.
 
  
 0.874
lptC
Lipopolysaccharide-assembly, LptC-related.
 
 
 0.793
ALJ58782.1
Biopolymer transport protein ExbD/TolR.
  
   
 0.782
ALJ58783.1
Biopolymer transport protein ExbD/TolR.
  
   
 0.782
ALJ61686.1
Hypothetical protein.
 
  
 0.775
ALJ61113.1
Hypothetical protein.
  
     0.771
ALJ61692.1
Hypothetical protein.
 
     0.766
rlmN
Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.759
ALJ58785.1
Biopolymer transport protein ExbB.
 
   
 0.748
tonB_2
Gram-negative bacterial tonB protein.
 
  
 0.742
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.