Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61692.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
ALJ61691.1
Hypothetical protein.
 
    0.889
secG
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.827
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.824
norR2
Nitric oxide reductase transcription regulator NorR2.
       0.824
ALJ62641.1
Sporulation related domain protein.
 
     0.765
ALJ61112.1
Hypothetical protein.
  
     0.750
ALJ61688.1
Hypothetical protein.
 
     0.733
ALJ58173.1
Sporulation related domain protein.
  
     0.727
ALJ61851.1
YbbR-like protein.
  
     0.726
ALJ58300.1
Hypothetical protein.
  
     0.722
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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