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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61694.1Major Facilitator Superfamily protein. (463 aa)    
Predicted Functional Partners:
pqqD
Coenzyme PQQ synthesis protein D.
       0.811
ALJ61691.1
Hypothetical protein.
 
     0.717
norR2
Nitric oxide reductase transcription regulator NorR2.
  
  
 0.703
secG
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
     
 0.697
ALJ61692.1
Hypothetical protein.
       0.680
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.678
ALJ61688.1
Hypothetical protein.
     
 0.595
pepDA
Dipeptidase A.
  
     0.571
dtpA_1
Dipeptide and tripeptide permease A.
 
  
 0.541
ALJ57294.1
Phage capsid family protein.
   
    0.524
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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