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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ61714.1TonB-dependent Receptor Plug Domain protein. (1004 aa)    
Predicted Functional Partners:
ALJ61713.1
SusD family protein.
 
     0.930
ALJ59678.1
SusD family protein.
 
     0.782
ALJ58361.1
SusD family protein.
 
 
   0.754
ALJ58601.1
SusD family protein.
  
 
 0.744
ALJ59253.1
SusD family protein.
 
     0.744
ALJ60367.1
SusD family protein.
 
     0.737
ALJ62112.1
SusD family protein.
  
 
   0.730
ALJ60528.1
SusD family protein.
 
 
   0.724
ALJ60870.1
SusD family protein.
 
 
   0.723
ALJ58008.1
SusD family protein.
  
 
   0.722
Your Current Organism:
Bacteroides cellulosilyticus
NCBI taxonomy Id: 246787
Other names: B. cellulosilyticus, Bacteroides cellulosilyticus Robert et al. 2007 emend. Hahnke et al. 2016, CCUG 44979, DSM 14838, JCM 15632, strain CRE21
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